species:   Drmel
pid:       MI0000421
parent:    dme-mir-309
paralog:   
locus:     NT_033778.4:19661706-19661774
matures:   ['GCACUGGGUAAAGUUUGUCCUA', 'CGACAAACCUUGUUCGGUUUUG']
srr:       SRR11906542
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram NT_033778.4:19661706-19661774

0 out of bounds
7 alignments
7 proper strand
7 stranded perfect matches

     ***********************             ***********************     
AUUAUACGACAAACCUUGUUCGGUUUUGCCAAUUUCCAAGCCAGCACUGGGUAAAGUUUGUCCUAUAAU
((((((.(((((((.(((((((((.(((.(.........).))).))))))))).))))))).))))))
-------------------------------------------GCACUGGGUAAAGUUUGUCCUA---- l=22 a=2 c
------CGACAAACCUUGUUCGGUUUUG----------------------------------------- l=22 a=0 c*
-------------------------------------------GCACUGGGUAAAGUUUGUCCU----- l=21 a=5 ma
-------GACAAACCUUGUUCGGUUUUG----------------------------------------- l=21 a=0 ma*

-------------------------------------------GCACUGGGUAAAGUUUGUCCU----- l=21 a=5 (ma)
-------------------------------------------GCACUGGGUAAAGUUUGUCCUA---- l=22 a=2 (c)

mb-01011
ax-1011111
ku-01
ss-111111111110
fn-011
